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  • Top cofit genes for PS417_03490 from Pseudomonas simiae WCS417

    type III secretion system protein SsaR
    SEED: Type III secretion inner membrane protein (YscR,SpaR,HrcR,EscR,homologous to flagellar export components)
    KEGG: type III secretion protein SctR

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_20580 isocitrate dehydrogenase no 0.24
    2 PS417_02645 aldehyde dehydrogenase 0.30 0.23
    3 PS417_09030 alpha/beta hydrolase no 0.22
    4 PS417_09460 alkanesulfonate monooxygenase no 0.21
    5 PS417_15930 thioredoxin reductase no 0.21
    6 PS417_24155 ATP-binding protein no 0.21
    7 PS417_00880 hypothetical protein no 0.20
    8 PS417_12925 serine dehydratase no 0.20
    9 PS417_18920 hypothetical protein no 0.19
    10 PS417_17650 proteinase no 0.19
    11 PS417_09565 DNA polymerase II no 0.19
    12 PS417_17980 ABC transporter permease no 0.19
    13 PS417_06905 alcohol dehydrogenase no 0.19
    14 PS417_24030 MFS transporter no 0.19
    15 PS417_03285 chromosome partitioning protein no 0.19
    16 PS417_16030 sulfurtransferase 0.33 0.19
    17 PS417_27965 hypothetical protein no 0.18
    18 PS417_02125 cobalamin biosynthesis protein CobQ 0.19 0.18
    19 PS417_03350 cytochrome C peroxidase no 0.18
    20 PS417_01730 histidine ABC transporter substrate-binding protein 0.51 0.18

    Or look for negative cofitness