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  • Top cofit genes for GFF6859 from Variovorax sp. SCN45

    Two-component transcriptional response regulator, OmpR family
    KEGG: two-component system, OmpR family, response regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5521 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128) 0.23 0.50
    2 GFF6615 putative plasmid stabilization protein no 0.48
    3 GFF3914 Ferrous iron transport peroxidase EfeB no 0.48
    4 GFF5765 Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) no 0.48
    5 GFF153 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.47
    6 GFF3539 Probable ALANIN-rich signal peptide protein no 0.46
    7 GFF2440 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.46
    8 GFF4906 hypothetical protein no 0.45
    9 GFF668 Transcriptional regulator, LysR family no 0.45
    10 GFF2989 hypothetical protein no 0.45
    11 GFF4209 no description no 0.45
    12 GFF7308 Uncharacterized MFS-type transporter no 0.44
    13 GFF4207 hypothetical protein no 0.44
    14 GFF3620 hypothetical protein no 0.44
    15 GFF2223 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.43
    16 GFF4734 Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) no 0.42
    17 GFF5047 hypothetical protein no 0.42
    18 GFF4737 Nitrate ABC transporter, substrate-binding protein no 0.41
    19 GFF1148 hypothetical protein no 0.41
    20 GFF2057 23S rRNA (adenine(2030)-N(6))-methyltransferase (EC 2.1.1.266) no 0.41

    Or look for negative cofitness