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  • Top cofit genes for GFF6844 from Variovorax sp. SCN45

    Putative PpiC-type peptidyl-prolyl cis-trans isomerase precursor associated with VreARI signaling system
    KEGG: peptidylprolyl isomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5936 T6SS AAA+ chaperone ClpV (TssH) 0.30 0.57
    2 GFF3829 hypothetical protein no 0.53
    3 GFF5853 Type I secretion system ATPase, LssB family LapB no 0.52
    4 GFF4452 Two-component transcriptional response regulator, LuxR family no 0.50
    5 GFF3474 Alkyl sulfatase and related hydrolases, MBL-fold metallo-hydrolase superfamily no 0.49
    6 GFF1130 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) no 0.49
    7 GFF5626 Patatin no 0.48
    8 GFF2649 putative autotransporter protein no 0.48
    9 GFF3371 FIG00456413: hypothetical protein no 0.47
    10 GFF3956 no description no 0.47
    11 GFF1295 FIG00455815: hypothetical protein no 0.47
    12 GFF6792 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) no 0.47
    13 GFF3820 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.46
    14 GFF7022 Amidohydrolase domain protein no 0.45
    15 GFF6552 Uncharacterized lipoprotein Bmul_4930 no 0.45
    16 GFF6319 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.45
    17 GFF4238 no description no 0.45
    18 GFF959 Phage holin no 0.44
    19 GFF4159 no description no 0.44
    20 GFF6148 hypothetical protein no 0.44

    Or look for negative cofitness