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Cofit
Protein
Homologs
Top cofit genes for GFF6841 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6415
ATP-dependent DNA helicase RecQ
0.18
0.64
2
GFF6217
hypothetical protein
no
0.55
3
GFF5441
4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein
no
0.55
4
GFF5055
BUG/TctC family periplasmic protein
no
0.54
5
GFF4603
Short-chain dehydrogenase, associated with 2-hydroxychromene-2-carboxylate isomerase family protein
no
0.53
6
GFF420
Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)
no
0.53
7
GFF4261
RNA polymerase ECF-type sigma factor
no
0.53
8
GFF6058
ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron)
no
0.53
9
GFF3072
Putative transmembrane protein
no
0.52
10
GFF4612
Short-chain dehydrogenase/reductase SDR
0.21
0.50
11
GFF1769
Urease accessory protein UreD
0.24
0.50
12
GFF5199
Galactofuranose ABC transporter, permease protein 2
no
0.50
13
GFF6104
Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4)
no
0.49
14
GFF5648
ABC transporter, substrate-binding protein (cluster 12, methionine/phosphonates)
no
0.49
15
GFF6408
Urocanate hydratase (EC 4.2.1.49)
no
0.49
16
GFF4582
TRAP-type C4-dicarboxylate transport system, small permease component
no
0.49
17
GFF4246
FIG00464377: hypothetical protein
no
0.49
18
GFF4019
Arsenical-resistance protein ACR3
no
0.49
19
GFF5986
hypothetical protein
no
0.48
20
GFF5732
Methyl-accepting chemotaxis sensor/transducer protein
no
0.48
Or look for
negative cofitness