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  • Top cofit genes for GFF6834 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2541 FIG00899427: hypothetical protein no 0.69
    2 GFF3541 hypothetical protein no 0.64
    3 GFF6798 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.62
    4 GFF5440 RNA polymerase ECF-type sigma factor no 0.61
    5 GFF4719 hypothetical protein no 0.60
    6 GFF2357 DNA repair protein RecN no 0.60
    7 GFF1927 Alkanesulfonates-binding protein no 0.60
    8 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) no 0.59
    9 GFF2366 Tricarboxylate transport protein TctC no 0.59
    10 GFF5771 Flagellar biosynthesis protein FlhA no 0.59
    11 GFF2601 Transcriptional regulator, IclR family no 0.59
    12 GFF839 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) no 0.58
    13 GFF1857 FIG00553873: hypothetical protein no 0.58
    14 GFF2474 Two-component transcriptional response regulator SMc02366, LuxR family no 0.58
    15 GFF2480 Urease accessory protein UreG no 0.58
    16 GFF849 putative carboxylesterase no 0.57
    17 GFF1466 Quinone oxidoreductase (EC 1.6.5.5) no 0.57
    18 GFF6509 hypothetical protein no 0.57
    19 GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) no 0.57
    20 GFF3562 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) no 0.56

    Or look for negative cofitness