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Cofit
Protein
Homologs
Top cofit genes for GFF6830 from
Variovorax sp. SCN45
penicillin amidase family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2587
hypothetical protein
no
0.54
2
GFF6856
DipZ protein
no
0.51
3
GFF5607
Sigma-54 activated regulatory protein
no
0.51
4
GFF7358
Phenylacetate ABC transporter, permease protein 2
no
0.50
5
GFF6230
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
no
0.50
6
GFF5096
similar to protocatechuate 4,5-dioxygenase beta chain
no
0.50
7
GFF3438
Amidohydrolase family protein
no
0.49
8
GFF1472
Tricarboxylate transport protein TctC
no
0.49
9
GFF7410
no description
no
0.49
10
GFF2593
Integral membrane protein
no
0.49
11
GFF1902
hypothetical protein
no
0.48
12
GFF3153
Two-component transcriptional response regulator, LuxR family
no
0.48
13
GFF4979
no description
no
0.48
14
GFF2682
Protein containing domains DUF403
0.27
0.47
15
GFF336
no description
no
0.46
16
GFF1760
Probable transmembrane protein
no
0.46
17
GFF95
hypothetical protein
no
0.46
18
GFF6072
Transcriptional regulator, LysR family
no
0.46
19
GFF5999
DNA polymerase IV (EC 2.7.7.7)
no
0.46
20
GFF7103
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (EC 5.3.3.-)
no
0.45
Or look for
negative cofitness