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  • Top cofit genes for GFF6824 from Variovorax sp. SCN45

    Pyruvate:Oxaloacetate transcarboxylase domain protein
    SEED: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5243 General secretion pathway protein H no 0.70
    2 GFF7062 probable carboxylesterase no 0.65
    3 GFF7212 Nitrilotriacetate monooxygenase [FMNH2] no 0.64
    4 GFF1968 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.60
    5 GFF1729 HIPA PROTEIN no 0.57
    6 GFF5463 RidA/YER057c/UK114 superfamily protein no 0.57
    7 GFF1542 Anti-sigma B factor RsbT / Phosphoserine phosphatase RsbX (EC 3.1.3.3) no 0.56
    8 GFF4455 TonB protein no 0.55
    9 GFF3481 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.55
    10 GFF7105 Homoprotocatechuate degradative operon repressor no 0.55
    11 GFF6069 Permease of the drug/metabolite transporter (DMT) superfamily no 0.55
    12 GFF5941 hypothetical protein no 0.54
    13 GFF6133 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.54
    14 GFF3754 Fumarylacetoacetate hydrolase family protein no 0.53
    15 GFF6516 Cytochrome c oxidase polypeptide II (EC 1.9.3.1) no 0.53
    16 GFF4218 no description no 0.53
    17 GFF5249 Protein YhfA no 0.52
    18 GFF4550 NAD(FAD)-utilizing dehydrogenase, sll0175 homolog no 0.51
    19 GFF3670 Two-component system sensor histidine kinase no 0.51
    20 GFF4247 no description no 0.51

    Or look for negative cofitness