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  • Top cofit genes for GFF6821 from Variovorax sp. SCN45

    ribonuclease H
    KEGG: ribonuclease HI

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6008 Citrate synthase (si) (EC 2.3.3.1) no 0.66
    2 GFF3566 Transcriptional regulator, LysR family no 0.62
    3 GFF1605 no description no 0.62
    4 GFF1848 Proteins incorrectly called adenylate cyclase no 0.54
    5 GFF2431 RNA polymerase ECF-type sigma factor no 0.53
    6 GFF615 beta-glucosidase (EC 3.2.1.21) no 0.52
    7 GFF694 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (EC 3.7.1.-) no 0.52
    8 GFF7029 hypothetical protein no 0.51
    9 GFF5734 Methyl-accepting chemotaxis sensor/transducer protein no 0.50
    10 GFF6834 no description no 0.50
    11 GFF1670 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) no 0.50
    12 GFF259 Bis-ABC ATPase YheS no 0.50
    13 GFF5542 no description no 0.49
    14 GFF2480 Urease accessory protein UreG no 0.49
    15 GFF5373 Xylose isomerase-like TIM-barrel protein KPN_00539 no 0.49
    16 GFF6103 no description no 0.48
    17 GFF4214 L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 2 AapM no 0.48
    18 GFF5898 FIG026291: Hypothetical periplasmic protein no 0.48
    19 GFF1818 FIG00932412: hypothetical protein no 0.48
    20 GFF4410 Transcriptional regulator, LysR family no 0.47

    Or look for negative cofitness