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  • Top cofit genes for GFF6808 from Variovorax sp. SCN45

    Peroxiredoxin OsmC (EC 1.11.1.15)
    SEED: Osmotically inducible protein C
    KEGG: osmotically inducible protein OsmC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6276 Uncharacterized MFS-type transporter no 0.53
    2 GFF801 Murein hydrolase activator NlpD no 0.51
    3 GFF7148 D-amino-acid oxidase (EC 1.4.3.3) no 0.51
    4 GFF3166 Transcriptional regulator, IclR family no 0.50
    5 GFF5750 Flagellar M-ring protein FliF no 0.49
    6 GFF4459 Acyl-CoA:1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51) no 0.49
    7 GFF812 Putative reductase no 0.48
    8 GFF6829 Glutathione S-transferase (EC 2.5.1.18) no 0.48
    9 GFF723 RNA polymerase ECF-type sigma factor no 0.48
    10 GFF7369 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.25 0.48
    11 GFF4365 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) no 0.47
    12 GFF67 Glycosyl transferase, group 1 no 0.47
    13 GFF2067 OmpA/MotB no 0.47
    14 GFF6164 FIG01094124: hypothetical protein no 0.47
    15 GFF3314 FIG00349255: hypothetical protein no 0.47
    16 GFF4804 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE no 0.47
    17 GFF3491 Ser/Thr protein phosphatase family protein no 0.46
    18 GFF476 InterPro IPR005134 COGs COG2862 0.44 0.46
    19 GFF5992 BUG/TctC family periplasmic protein no 0.46
    20 GFF1460 Enoyl-CoA hydratase/isomerase no 0.46

    Or look for negative cofitness