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  • Top cofit genes for GFF680 from Variovorax sp. SCN45

    RecA/RadA recombinase
    SEED: RecA/RadA recombinase
    KEGG: protein ImuA

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6480 hypothetical protein no 0.70
    2 GFF2400 no description no 0.70
    3 GFF1577 hypothetical protein no 0.67
    4 GFF570 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) no 0.65
    5 GFF3981 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.62
    6 GFF4679 Inositol-1-monophosphatase (EC 3.1.3.25) no 0.61
    7 GFF2381 Ribonuclease PH (EC 2.7.7.56) no 0.61
    8 GFF3440 FIG00460300: hypothetical protein no 0.59
    9 GFF730 Class A beta-lactamase (EC 3.5.2.6) no 0.58
    10 GFF4064 no description no 0.57
    11 GFF7043 Putative transmembrane protein no 0.56
    12 GFF2111 Permease of the drug/metabolite transporter (DMT) superfamily no 0.56
    13 GFF6764 Transcriptional regulator, MarR family no 0.55
    14 GFF1136 hypothetical protein no 0.55
    15 GFF6097 1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149) no 0.55
    16 GFF4364 Transcriptional regulator, LysR family no 0.55
    17 GFF3731 Glutathione S-transferase no 0.55
    18 GFF3713 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) no 0.54
    19 GFF2149 Hydroxymethylpyrimidine phosphate kinase ThiD (EC 2.7.4.7) no 0.54
    20 GFF6825 CaiB/BaiF family protein no 0.54

    Or look for negative cofitness