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  • Top cofit genes for GFF6788 from Variovorax sp. SCN45

    Multicopper oxidase
    SEED: Multicopper oxidase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3410 Transcriptional regulator, AraC family no 0.61
    2 GFF6227 hypothetical protein no 0.61
    3 GFF6892 Uncharacterized glutathione S-transferase-like protein no 0.60
    4 GFF2792 Chaperone protein ClpB (ATP-dependent unfoldase) no 0.60
    5 GFF46 Transcriptional regulators of sugar metabolism no 0.57
    6 GFF899 Dienelactone hydrolase family protein no 0.56
    7 GFF5341 Efflux ABC transporter, permease protein no 0.55
    8 GFF4156 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.55
    9 GFF5299 TonB-dependent receptor no 0.55
    10 GFF6034 Replication-associated recombination protein RarA no 0.54
    11 GFF6247 ApaG protein 0.24 0.54
    12 GFF1026 Probable chromate transporter protein no 0.53
    13 GFF803 MutT/Nudix family protein no 0.52
    14 GFF6685 LSU ribosomal protein L36p @ LSU ribosomal protein L36p, zinc-independent no 0.52
    15 GFF3366 Septum site-determining protein MinD no 0.51
    16 GFF6750 hypothetical protein no 0.51
    17 GFF1508 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.51
    18 GFF1678 Transcriptional regulator, GntR family no 0.51
    19 GFF1331 Transcriptional regulator, AraC family no 0.50
    20 GFF151 FIG00460174: hypothetical protein no 0.50

    Or look for negative cofitness