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  • Top cofit genes for GFF6782 from Variovorax sp. SCN45

    TRAP transporter solute receptor, TAXI family precursor
    SEED: TRAP transporter solute receptor, TAXI family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7357 Phenylacetate ABC transporter, ATP-binding protein 1 no 0.64
    2 GFF5792 Mg2+ and Co2+ transporters no 0.62
    3 GFF6653 Aminotransferase, class III no 0.57
    4 GFF3562 UDP-glucose 6-dehydrogenase (EC 1.1.1.22) no 0.57
    5 GFF5084 FIG00933367: hypothetical protein no 0.57
    6 GFF6770 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) no 0.56
    7 GFF3044 LPS-assembly protein LptD @ Organic solvent tolerance protein precursor no 0.56
    8 GFF6591 Transcriptional regulator, GntR family no 0.55
    9 GFF3302 no description no 0.55
    10 GFF1513 Cytochrome c551/c552 no 0.54
    11 GFF6527 Transcriptional regulator, AcrR family no 0.54
    12 GFF3924 Ferredoxin no 0.54
    13 GFF706 hypothetical protein no 0.54
    14 GFF2658 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) no 0.53
    15 GFF1524 FIG006045: Sigma factor, ECF subfamily no 0.53
    16 GFF3483 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.53
    17 GFF4484 ATP-dependent protease subunit HslV (EC 3.4.25.2) no 0.53
    18 GFF3374 no description no 0.53
    19 GFF2192 FIG00932626: hypothetical protein no 0.52
    20 GFF1166 Murein-DD-endopeptidase (EC 3.4.99.-) 0.56 0.52

    Or look for negative cofitness