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  • Top cofit genes for PS417_03450 from Pseudomonas simiae WCS417

    RNA polymerase sigma factor
    SEED: RNA polymerase sigma-54 factor RpoN

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_24950 hypothetical protein no 0.25
    2 PS417_25035 hypothetical protein no 0.22
    3 PS417_09850 hypothetical protein no 0.22
    4 PS417_00840 hypothetical protein no 0.22
    5 PS417_07910 hypothetical protein no 0.21
    6 PS417_10730 hypothetical protein no 0.21
    7 PS417_23155 pilus assembly protein PilW no 0.21
    8 PS417_11900 conjugal transfer protein TraR 0.47 0.20
    9 PS417_26310 serine dehydratase no 0.20
    10 PS417_27610 hypothetical protein no 0.20
    11 PS417_07915 relaxase no 0.19
    12 PS417_12140 histidine kinase no 0.19
    13 PS417_01440 hypothetical protein no 0.19
    14 PS417_06355 protein-L-isoaspartate O-methyltransferase no 0.19
    15 PS417_05980 chemotaxis protein CheA no 0.19
    16 PS417_26525 DEAD/DEAH box helicase no 0.19
    17 PS417_01190 diguanylate phosphodiesterase no 0.18
    18 PS417_04450 hypothetical protein no 0.18
    19 PS417_22965 DNA mismatch repair protein MutT no 0.18
    20 PS417_00545 hypothetical protein 0.40 0.18

    Or look for negative cofitness