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  • Top cofit genes for GFF678 from Variovorax sp. SCN45

    Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7)
    SEED: DNA polymerase III alpha subunit (EC 2.7.7.7)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3424 FIG00443816: hypothetical protein 0.42 0.55
    2 GFF5259 Na+/solute symporter no 0.53
    3 GFF4246 FIG00464377: hypothetical protein no 0.50
    4 GFF1815 Uricase (urate oxidase) (EC 1.7.3.3) 0.37 0.47
    5 GFF7330 Transcription elongation factor 0.42 0.47
    6 GFF142 Oxidoreductase no 0.46
    7 GFF7003 Flagellar basal-body rod protein FlgF no 0.46
    8 GFF493 RND efflux system, inner membrane transporter 0.34 0.46
    9 GFF5303 Tricarboxylate transport transcriptional regulator TctD 0.34 0.45
    10 GFF5399 Altronate dehydratase (EC 4.2.1.7) no 0.45
    11 GFF4580 hypothetical protein no 0.44
    12 GFF6936 ABC transporter, ATP-binding protein no 0.44
    13 GFF3848 Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C 0.49 0.44
    14 GFF2728 hypothetical protein no 0.44
    15 GFF3468 Nucleoside-diphosphate-sugar epimerases no 0.44
    16 GFF4710 MutT/Nudix family protein no 0.44
    17 GFF608 VgrG protein no 0.44
    18 GFF2705 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.43
    19 GFF1788 hypothetical protein no 0.43
    20 GFF6507 no description no 0.43

    Or look for negative cofitness