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  • Top cofit genes for GFF6769 from Variovorax sp. SCN45

    Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases
    SEED: Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6383 FIG00440100: hypothetical protein no 0.67
    2 GFF5352 Split AAA-ATPase protein PA0787 no 0.62
    3 GFF3960 3'-to-5' oligoribonuclease (orn) no 0.60
    4 GFF6784 D-amino acid dehydrogenase (EC 1.4.99.6) no 0.59
    5 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) no 0.59
    6 GFF6015 Transcriptional regulator PA0877, LysR family no 0.59
    7 GFF374 Transcription elongation factor GreA no 0.59
    8 GFF924 hypothetical protein no 0.58
    9 GFF4611 Predicted transcriptional regulator for fatty acid degradation FadP, TetR family no 0.58
    10 GFF2815 Primosomal replication protein N no 0.58
    11 GFF1353 Short-chain dehydrogenase/reductase SDR no 0.57
    12 GFF1737 Carbon starvation protein A 0.45 0.57
    13 GFF7222 Coenzyme F390 synthetase no 0.57
    14 GFF198 Isochorismate pyruvate-lyase (EC 4.2.99.21) no 0.57
    15 GFF399 3'-to-5' exoribonuclease RNase R no 0.56
    16 GFF2909 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) no 0.56
    17 GFF1538 hypothetical protein no 0.55
    18 GFF6575 Conjugative transfer protein TrbJ no 0.55
    19 GFF5901 no description no 0.55
    20 GFF4773 Broad-specificity amino acid ABC transporter, ATP-binding protein 1 no 0.54

    Or look for negative cofitness