Private Fitness
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Cofit
Protein
Homologs
Top cofit genes for GFF675 from
Variovorax sp. SCN45
KEGG: 2'-5' RNA ligase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1596
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
no
0.66
2
GFF4925
ATPase component BioM of energizing module of biotin ECF transporter
no
0.65
3
GFF6355
T6SS secretion lipoprotein TssJ (VasD)
no
0.59
4
GFF2261
Adenylate cyclase (EC 4.6.1.1)
no
0.58
5
GFF2680
Protein of unknown function DUF1058
no
0.58
6
GFF6434
Inner membrane protein YqiK
no
0.56
7
GFF6534
Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)
no
0.54
8
GFF5470
ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
no
0.54
9
GFF2868
Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215)
no
0.52
10
GFF3739
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60)
no
0.52
11
GFF538
FIG00454528: hypothetical protein
no
0.52
12
GFF3715
Probable malonic semialdehyde reductase RutE (EC 1.1.1.298)
no
0.51
13
GFF1602
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
no
0.51
14
GFF4347
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1)
no
0.50
15
GFF558
hypothetical protein
no
0.50
16
GFF1727
no description
no
0.50
17
GFF165
Chromate transport protein ChrA
no
0.50
18
GFF2173
no description
no
0.49
19
GFF4416
Conjugative transfer protein TrbD
no
0.49
20
GFF1927
Alkanesulfonates-binding protein
no
0.49
Or look for
negative cofitness