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  • Top cofit genes for GFF6741 from Variovorax sp. SCN45

    UPF0053 inner membrane protein YoaE
    SEED: Magnesium and cobalt efflux protein CorC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF626 CzcABC family efflux RND transporter, transmembrane protein no 0.60
    2 GFF2543 Uncharacterized membrane protein Bcep18194_A6058 0.10 0.58
    3 GFF6885 hypothetical protein no 0.58
    4 GFF870 TonB-dependent receptor no 0.56
    5 GFF1792 Transcriptional regulator, IclR family no 0.55
    6 GFF808 Polyhydroxyalkanoic acid synthase 0.52 0.54
    7 GFF2780 Phosphoesterase, PA-phosphatase related no 0.54
    8 GFF3017 T6SS AAA+ chaperone ClpV (TssH) no 0.53
    9 GFF724 Fe2+-dicitrate sensor, membrane component 0.36 0.52
    10 GFF4146 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 0.62 0.52
    11 GFF1190 Glycine oxidase ThiO (EC 1.4.3.19) no 0.52
    12 GFF4664 hypothetical protein no 0.51
    13 GFF6581 Coupling protein VirD4, ATPase required for T-DNA transfer no 0.51
    14 GFF4773 Broad-specificity amino acid ABC transporter, ATP-binding protein 1 no 0.50
    15 GFF1873 KEGG: LacI family transcriptional regulator no 0.50
    16 GFF2899 no description no 0.50
    17 GFF1053 no description 0.37 0.50
    18 GFF4173 5-methyltetrahydropteroyltriglutamate--homocystei ne methyltransferase (EC 2.1.1.14) no 0.50
    19 GFF7209 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.50
    20 GFF1118 Hydroxyacylglutathione hydrolase (EC 3.1.2.6) no 0.49

    Or look for negative cofitness