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Cofit
Protein
Homologs
Top cofit genes for PS417_03420 from
Pseudomonas simiae WCS417
hypothetical protein
SEED: Type III effector protein AvrE1
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PS417
_14745
hypothetical protein
no
0.23
2
PS417
_19150
ABC transporter ATP-binding protein
no
0.22
3
PS417
_05960
chemotaxis protein
no
0.21
4
PS417
_26875
histidine kinase
no
0.21
5
PS417
_28250
cell wall assembly protein
no
0.20
6
PS417
_04710
amino acid ABC transporter substrate-binding protein
no
0.20
7
PS417
_18140
hypothetical protein
no
0.20
8
PS417
_11055
AraC family transcriptional regulator
no
0.19
9
PS417
_01905
poly(R)-hydroxyalkanoic acid synthase
no
0.19
10
PS417
_05140
dipicolinate synthase
no
0.18
11
PS417
_06450
iron ABC transporter substrate-binding protein
no
0.18
12
PS417
_24445
4-hydroxyphenylpyruvate dioxygenase
no
0.18
13
PS417
_06470
histidine kinase
no
0.17
14
PS417
_27655
LysR family transcriptional regulator
no
0.17
15
PS417
_02125
cobalamin biosynthesis protein CobQ
no
0.17
16
PS417
_24265
ABC transporter ATP-binding protein
no
0.17
17
PS417
_19290
long-chain acyl-CoA synthetase
no
0.17
18
PS417
_07340
calcium channel protein
no
0.17
19
PS417
_01820
chemotaxis protein
no
0.17
20
PS417
_08520
hypothetical protein
no
0.17
Or look for
negative cofitness