Top cofit genes for GFF6715 from Variovorax sp. SCN45

Transcriptional regulator of RpiR family in catabolic operon
SEED: Probable transcriptional regulator

Rank Hit Name Description Conserved? Cofitness  
1 GFF2499 ATP/GTP-binding protein no 0.74
2 GFF4768 Transcriptional regulator, MarR family no 0.72
3 GFF6040 LSU ribosomal protein L33p @ LSU ribosomal protein L33p, zinc-independent 0.34 0.72
4 GFF2522 Glutaredoxin-related protein no 0.71
5 GFF3320 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) no 0.71
6 GFF4398 Transcriptional regulator, AcrR family no 0.70
7 GFF213 tmRNA-binding protein SmpB no 0.70
8 GFF2006 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) no 0.69
9 GFF2572 Protein-export protein SecB (maintains pre-export unfolded state) no 0.69
10 GFF7291 Magnesium and cobalt transport protein CorA no 0.69
11 GFF3067 Nitrogen regulation protein NtrB (EC 2.7.13.3) no 0.68
12 GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) no 0.68
13 GFF4449 TldD protein, part of TldE/TldD proteolytic complex no 0.68
14 GFF3404 Benzoyl-CoA-dihydrodiol lyase (EC 4.1.2.44) no 0.68
15 GFF342 ATP-dependent Clp protease adaptor protein ClpS no 0.67
16 GFF3653 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) 0.30 0.67
17 GFF2141 GTP-binding and nucleic acid-binding protein YchF 0.30 0.67
18 GFF2013 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) no 0.67
19 GFF6388 Transcriptional regulator, AcrR family no 0.67
20 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX no 0.67

Or look for negative cofitness