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  • Top cofit genes for GFF6714 from Variovorax sp. SCN45

    Putative cryptic D-serine deaminase (EC 4.3.1.18)
    SEED: low-specificity D-threonine aldolase
    KEGG: D-serine dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1708 no description no 0.60
    2 GFF7322 hypothetical protein no 0.53
    3 GFF6590 Niacin transporter NiaP 0.54 0.52
    4 GFF3073 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) 0.49 0.52
    5 GFF6973 Mobile element protein no 0.50
    6 GFF6754 no description no 0.49
    7 GFF4124 no description no 0.48
    8 GFF4805 Epoxyqueuosine reductase (EC 1.17.99.6) QueG no 0.48
    9 GFF1640 Polyketide synthase modules and related proteins no 0.48
    10 GFF3662 hypothetical protein no 0.47
    11 GFF5793 Low-affinity inorganic phosphate transporter no 0.47
    12 GFF4856 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) no 0.47
    13 GFF1653 Transcriptional regulator, AcrR family no 0.47
    14 GFF6119 Glutamate carboxypeptidase (EC 3.4.17.11) no 0.46
    15 GFF2692 hypothetical protein no 0.46
    16 GFF2021 FIG00538369: hypothetical protein no 0.46
    17 GFF2215 L,D-transpeptidase no 0.46
    18 GFF6026 no description no 0.46
    19 GFF1117 FIG005121: SAM-dependent methyltransferase (EC 2.1.1.-) 0.54 0.45
    20 GFF5938 T6SS component TssF (ImpG/VasA) no 0.44

    Or look for negative cofitness