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  • Top cofit genes for GFF6709 from Variovorax sp. SCN45

    Putative hemagglutinin-related protein
    SEED: 6-phosphogluconolactonase (EC 3.1.1.31)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF543 Uncharacterized deacetylase PA5390 no 0.60
    2 GFF2050 hypothetical protein no 0.55
    3 GFF1497 BUG/TctC family periplasmic protein no 0.52
    4 GFF1614 Phosphonate ABC transporter ATP-binding protein PhnC (TC 3.A.1.9.1) no 0.52
    5 GFF2088 Putative lipase in cluster with Phosphatidate cytidylyltransferase no 0.52
    6 GFF7265 hypothetical protein, not 6-phosphogluconolactonase 0.39 0.50
    7 GFF5858 heme uptake regulator no 0.49
    8 GFF1822 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) no 0.49
    9 GFF4106 ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) no 0.49
    10 GFF1656 hypothetical protein no 0.48
    11 GFF2212 KEGG: prepilin peptidase CpaA 0.22 0.48
    12 GFF1926 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.48
    13 GFF4256 Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82) no 0.47
    14 GFF4705 Monooxygenase, flavin-binding family no 0.47
    15 GFF6650 no description no 0.47
    16 GFF1090 Phosphohistidine phosphatase SixA no 0.47
    17 GFF4267 Transcriptional regulator, AraC family no 0.47
    18 GFF5971 hypothetical protein no 0.46
    19 GFF6455 Bll3817 protein no 0.46
    20 GFF2529 ABC transporter, permease protein PA3837 no 0.45

    Or look for negative cofitness