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  • Top cofit genes for GFF6700 from Variovorax sp. SCN45

    Single-stranded-DNA-specific exonuclease RecJ
    SEED: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
    KEGG: single-stranded-DNA-specific exonuclease

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF239 DNA polymerase III chi subunit (EC 2.7.7.7) no 0.68
    2 GFF6036 DNA translocase FtsK 0.72 0.63
    3 GFF2504 Cell division protein ZapD no 0.61
    4 GFF6294 Cell division protein no 0.58
    5 GFF4909 Two-component transcriptional response regulator, OmpR family no 0.56
    6 GFF2835 putative TonB-dependent receptor no 0.55
    7 GFF1119 Ribonuclease HI (EC 3.1.26.4) 0.38 0.54
    8 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.54 0.54
    9 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) 0.61 0.53
    10 GFF2734 DNA topoisomerase IV subunit B (EC 5.99.1.3) 0.46 0.53
    11 GFF4397 hypothetical protein no 0.53
    12 GFF2836 MotA/TolQ/ExbB proton channel family protein no 0.52
    13 GFF489 ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92) 0.35 0.52
    14 GFF1007 Xanthine-guanine phosphoribosyltransferase (EC 2.4.2.22) no 0.52
    15 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.51
    16 GFF6219 hypothetical protein no 0.51
    17 GFF4955 hypothetical protein no 0.51
    18 GFF5208 Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 no 0.50
    19 GFF456 Transcriptional regulator, AraC family no 0.50
    20 GFF7295 HPr kinase/phosphorylase 0.44 0.50

    Or look for negative cofitness