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  • Top cofit genes for GFF670 from Variovorax sp. SCN45

    putative amidase Psyr_2260

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF483 Fumarate hydratase class I, aerobic (EC 4.2.1.2) no 0.63
    2 GFF2357 DNA repair protein RecN 0.30 0.56
    3 GFF2 Transcription accessory protein (S1 RNA-binding domain) no 0.53
    4 GFF997 UPF0070 protein YfgM no 0.52
    5 GFF1230 Malic enzyme no 0.52
    6 GFF349 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) no 0.52
    7 GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) no 0.51
    8 GFF357 SOS-response repressor and protease LexA (EC 3.4.21.88) no 0.51
    9 GFF3367 Septum site-determining protein MinC 0.31 0.51
    10 GFF735 no description no 0.50
    11 GFF4454 Exoribonuclease II (EC 3.1.13.1) no 0.50
    12 GFF7073 no description no 0.50
    13 GFF5080 DNA recombination-dependent growth factor RdgC no 0.50
    14 GFF4840 FIG00956188: hypothetical protein no 0.50
    15 GFF491 no description no 0.50
    16 GFF5264 Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) no 0.50
    17 GFF2715 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) no 0.49
    18 GFF2344 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.48
    19 GFF167 Two-component system sensor histidine kinase 0.34 0.48
    20 GFF203 hypothetical protein 0.25 0.48

    Or look for negative cofitness