Private Fitness
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Gene
Fitness
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Cofit
Protein
Homologs
Top cofit genes for GFF670 from
Variovorax sp. SCN45
putative amidase Psyr_2260
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF483
Fumarate hydratase class I, aerobic (EC 4.2.1.2)
no
0.63
2
GFF2357
DNA repair protein RecN
0.30
0.56
3
GFF2
Transcription accessory protein (S1 RNA-binding domain)
no
0.53
4
GFF997
UPF0070 protein YfgM
no
0.52
5
GFF1230
Malic enzyme
no
0.52
6
GFF349
Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)
no
0.52
7
GFF988
LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23)
no
0.51
8
GFF357
SOS-response repressor and protease LexA (EC 3.4.21.88)
no
0.51
9
GFF3367
Septum site-determining protein MinC
0.31
0.51
10
GFF735
no description
no
0.50
11
GFF4454
Exoribonuclease II (EC 3.1.13.1)
no
0.50
12
GFF7073
no description
no
0.50
13
GFF5080
DNA recombination-dependent growth factor RdgC
no
0.50
14
GFF4840
FIG00956188: hypothetical protein
no
0.50
15
GFF491
no description
no
0.50
16
GFF5264
Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1)
no
0.50
17
GFF2715
2-ketogluconate 6-phosphate reductase (EC 1.1.1.43)
no
0.49
18
GFF2344
ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines)
no
0.48
19
GFF167
Two-component system sensor histidine kinase
0.34
0.48
20
GFF203
hypothetical protein
0.25
0.48
Or look for
negative cofitness