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  • Top cofit genes for GFF6698 from Variovorax sp. SCN45

    ClpXP protease specificity-enhancing factor SspB
    SEED: ClpXP protease specificity-enhancing factor / Stringent starvation protein B
    KEGG: stringent starvation protein B

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2505 hypothetical protein no 0.61
    2 GFF312 FIG021862: membrane protein, exporter no 0.58
    3 GFF5860 no description no 0.57
    4 GFF4906 hypothetical protein no 0.56
    5 GFF4408 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type no 0.55
    6 GFF6272 no description no 0.54
    7 GFF3893 hypothetical protein no 0.54
    8 GFF6711 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.53
    9 GFF5035 Opine oxidase subunit A no 0.53
    10 GFF5521 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128) no 0.53
    11 GFF1116 Membrane-bound lytic murein transglycosylase D no 0.53
    12 GFF3917 Ferrous iron transporter FeoB no 0.52
    13 GFF1119 Ribonuclease HI (EC 3.1.26.4) no 0.52
    14 GFF2652 Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) no 0.52
    15 GFF7027 no description no 0.51
    16 GFF5429 Iron(III) dicitrate transport protein FecA no 0.51
    17 GFF4937 no description no 0.51
    18 GFF955 N-acetylmuramoyl-L-alanine amidase, family 2 no 0.50
    19 GFF531 hypothetical protein no 0.50
    20 GFF3910 MORN repeat family protein no 0.50

    Or look for negative cofitness