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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF6693 from
Variovorax sp. SCN45
Two-component transcriptional response regulator, LuxR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5774
RNA polymerase sigma factor for flagellar operon
no
0.66
2
GFF1641
Polyketide synthase modules and related proteins
no
0.54
3
GFF6332
Maltodextrin glucosidase (EC 3.2.1.20)
no
0.52
4
GFF7117
2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9)
no
0.52
5
GFF2197
Type I secretion system ATPase, LssB family LapB
no
0.50
6
GFF3300
hypothetical protein
no
0.50
7
GFF6208
Cytosine/purine/uracil/thiamine/allantoin permease family protein
no
0.50
8
GFF623
Demethylmenaquinone methyltransferase-like protein
no
0.49
9
GFF2489
hypothetical protein
no
0.49
10
GFF6813
no description
no
0.48
11
GFF1213
Oligopeptide transport permease protein OppB-like @ Glutathione ABC transporter, permease protein GsiC
no
0.48
12
GFF5779
L-idonate 5-dehydrogenase (EC 1.1.1.264)
no
0.47
13
GFF6757
no description
no
0.46
14
GFF5990
RND efflux system, inner membrane transporter
no
0.46
15
GFF72
D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-)
no
0.46
16
GFF6148
hypothetical protein
no
0.46
17
GFF4726
hypothetical protein
no
0.45
18
GFF3707
ABC transporter, permease protein 1 (cluster 11, riboflavin/purine nucleoside/unknown)
no
0.45
19
GFF5761
Flagellar motor rotation protein MotA
no
0.45
20
GFF3939
Hydrolase, HAD superfamily
no
0.45
Or look for
negative cofitness