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  • Top cofit genes for GFF6693 from Variovorax sp. SCN45

    Two-component transcriptional response regulator, LuxR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5774 RNA polymerase sigma factor for flagellar operon no 0.66
    2 GFF1641 Polyketide synthase modules and related proteins no 0.54
    3 GFF6332 Maltodextrin glucosidase (EC 3.2.1.20) no 0.52
    4 GFF7117 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9) no 0.52
    5 GFF2197 Type I secretion system ATPase, LssB family LapB no 0.50
    6 GFF3300 hypothetical protein no 0.50
    7 GFF6208 Cytosine/purine/uracil/thiamine/allantoin permease family protein no 0.50
    8 GFF623 Demethylmenaquinone methyltransferase-like protein no 0.49
    9 GFF2489 hypothetical protein no 0.49
    10 GFF6813 no description no 0.48
    11 GFF1213 Oligopeptide transport permease protein OppB-like @ Glutathione ABC transporter, permease protein GsiC no 0.48
    12 GFF5779 L-idonate 5-dehydrogenase (EC 1.1.1.264) no 0.47
    13 GFF6757 no description no 0.46
    14 GFF5990 RND efflux system, inner membrane transporter no 0.46
    15 GFF72 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) no 0.46
    16 GFF6148 hypothetical protein no 0.46
    17 GFF4726 hypothetical protein no 0.45
    18 GFF3707 ABC transporter, permease protein 1 (cluster 11, riboflavin/purine nucleoside/unknown) no 0.45
    19 GFF5761 Flagellar motor rotation protein MotA no 0.45
    20 GFF3939 Hydrolase, HAD superfamily no 0.45

    Or look for negative cofitness