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  • Top cofit genes for GFF669 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6774 ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) no 0.60
    2 GFF7228 Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) no 0.59
    3 GFF710 Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) no 0.58
    4 GFF7315 no description no 0.57
    5 GFF7361 Acyl-coenzyme A thioesterase PaaD (Pse.pu.) (E. coli PaaI) no 0.57
    6 GFF4892 FIG00715976: hypothetical protein no 0.55
    7 GFF2250 Putative stomatin/prohibitin-family membrane protease subunit aq_911 no 0.55
    8 GFF6653 Aminotransferase, class III no 0.55
    9 GFF2015 Probable glutathione S-transferase (EC 2.5.1.18), YfcF homolog no 0.54
    10 GFF4634 Transketolase, C-terminal section (EC 2.2.1.1) no 0.53
    11 GFF3059 Transcriptional regulator, LysR family no 0.53
    12 GFF1658 Transcriptional regulator, LysR family no 0.53
    13 GFF3044 LPS-assembly protein LptD @ Organic solvent tolerance protein precursor no 0.53
    14 GFF4348 hypothetical protein no 0.53
    15 GFF602 Transcriptional regulator, LysR family => TcuR no 0.53
    16 GFF4109 Aspartate aminotransferase (EC 2.6.1.1) no 0.52
    17 GFF6978 no description no 0.52
    18 GFF6776 Maltodextrin ABC transporter, permease protein MdxG no 0.52
    19 GFF6701 Regulatory protein, RpfE type no 0.51
    20 GFF3137 hypothetical protein no 0.51

    Or look for negative cofitness