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Cofit
Protein
Homologs
Top cofit genes for GFF6687 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4868
Type IV secretory pathway, VirD2 components (relaxase)
no
0.53
2
GFF2739
Putative SAM-dependent methyltransferase Bucepa02006346
no
0.53
3
GFF3590
2-dehydropantoate 2-reductase (EC 1.1.1.169)
no
0.53
4
GFF3330
Isohexenylglutaconyl-CoA hydratase (EC 4.2.1.57)
no
0.52
5
GFF848
no description
no
0.52
6
GFF4941
Gfa-like protein
no
0.51
7
GFF6012
Tricarboxylate transport protein TctC
no
0.51
8
GFF7186
NAD-dependent protein deacetylase of SIR2 family
no
0.50
9
GFF493
RND efflux system, inner membrane transporter
no
0.50
10
GFF25
Alcohol dehydrogenase (EC 1.1.1.1)
no
0.49
11
GFF4930
Transcriptional regulator, LysR family
no
0.48
12
GFF4902
hypothetical protein
no
0.48
13
GFF1120
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
no
0.47
14
GFF6915
Alkyl hydroperoxide reductase and/or thiol-specific antioxidant family (AhpC/TSA) protein
no
0.47
15
GFF3572
Efflux ABC transporter, permease protein
no
0.47
16
GFF1279
ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines)
no
0.47
17
GFF1681
Methylisocitrate lyase (EC 4.1.3.30)
no
0.47
18
GFF5733
Methyl-accepting chemotaxis sensor/transducer protein
no
0.47
19
GFF1199
Uncharacterized protein similar to glutamate-1-semialdehyde aminotransferase
no
0.46
20
GFF145
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
no
0.46
Or look for
negative cofitness