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  • Top cofit genes for GFF6683 from Variovorax sp. SCN45

    Efflux ABC transporter, permease protein
    KEGG: ABC-2 type transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4068 Heavy metal sensor histidine kinase no 0.57
    2 GFF5487 Thymidine phosphorylase (EC 2.4.2.4) no 0.57
    3 GFF3709 ABC transporter, substrate-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) no 0.55
    4 GFF183 Virulence protein no 0.54
    5 GFF2919 no description no 0.53
    6 GFF3731 Glutathione S-transferase no 0.53
    7 GFF3475 Gate supefamily SpmA/SpmB domains protein no 0.53
    8 GFF5870 hypothetical protein no 0.52
    9 GFF5869 internalin, putative no 0.51
    10 GFF5210 hypothetical protein no 0.51
    11 GFF4487 putative secreted protein no 0.50
    12 GFF5868 hypothetical protein no 0.49
    13 GFF5684 3-ketoacyl-CoA thiolase (EC 2.3.1.16) no 0.49
    14 GFF7157 Peptidase M20D, amidohydrolase no 0.49
    15 GFF5410 Adenylate cyclase (EC 4.6.1.1) no 0.49
    16 GFF1369 Serine--glyoxylate aminotransferase (EC 2.6.1.45) no 0.47
    17 GFF7149 4-hydroxyproline epimerase (EC 5.1.1.8) no 0.47
    18 GFF6537 hypothetical protein no 0.47
    19 GFF1143 no description no 0.47
    20 GFF1922 Acyl-CoA dehydrogenase no 0.47

    Or look for negative cofitness