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  • Top cofit genes for GFF6682 from Variovorax sp. SCN45

    Efflux ABC transporter, permease protein
    SEED: Gll1302 protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6567 hypothetical protein no 0.54
    2 GFF1835 Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8) no 0.53
    3 GFF2722 Transcriptional regulator, LysR family no 0.53
    4 GFF4778 Broad-specificity amino acid ABC transporter, permease protein 1 no 0.52
    5 GFF7384 hypothetical protein 0.42 0.51
    6 GFF853 hypothetical protein no 0.50
    7 GFF4817 Hydroxymethylpyrimidine ABC transporter, ATPase component no 0.50
    8 GFF1763 HemK family modification methylase PA2179 no 0.50
    9 GFF7245 universal stress protein, UspA family no 0.50
    10 GFF4232 no description no 0.49
    11 GFF2863 no description no 0.49
    12 GFF3696 mRNA 3-end processing factor no 0.49
    13 GFF4427 hypothetical protein no 0.49
    14 GFF1587 no description no 0.49
    15 GFF3561 Glycosyltransferases involved in cell wall biogenesis no 0.49
    16 GFF3904 Probable signal peptide protein no 0.48
    17 GFF3804 BUG/TctC family periplasmic protein no 0.48
    18 GFF7257 KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor no 0.48
    19 GFF5330 no description no 0.48
    20 GFF3609 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47

    Or look for negative cofitness