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Cofit
Protein
Homologs
Top cofit genes for GFF6682 from
Variovorax sp. SCN45
Efflux ABC transporter, permease protein
SEED: Gll1302 protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6567
hypothetical protein
no
0.54
2
GFF1835
Indolepyruvate oxidoreductase subunit IorB II (EC 1.2.7.8)
no
0.53
3
GFF2722
Transcriptional regulator, LysR family
no
0.53
4
GFF4778
Broad-specificity amino acid ABC transporter, permease protein 1
no
0.52
5
GFF7384
hypothetical protein
0.42
0.51
6
GFF853
hypothetical protein
no
0.50
7
GFF4817
Hydroxymethylpyrimidine ABC transporter, ATPase component
no
0.50
8
GFF1763
HemK family modification methylase PA2179
no
0.50
9
GFF7245
universal stress protein, UspA family
no
0.50
10
GFF4232
no description
no
0.49
11
GFF2863
no description
no
0.49
12
GFF3696
mRNA 3-end processing factor
no
0.49
13
GFF4427
hypothetical protein
no
0.49
14
GFF1587
no description
no
0.49
15
GFF3561
Glycosyltransferases involved in cell wall biogenesis
no
0.49
16
GFF3904
Probable signal peptide protein
no
0.48
17
GFF3804
BUG/TctC family periplasmic protein
no
0.48
18
GFF7257
KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
no
0.48
19
GFF5330
no description
no
0.48
20
GFF3609
ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.47
Or look for
negative cofitness