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  • Top cofit genes for GFF668 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4209 no description no 0.60
    2 GFF3468 Nucleoside-diphosphate-sugar epimerases 0.27 0.57
    3 GFF6615 putative plasmid stabilization protein no 0.56
    4 GFF3570 Organic hydroperoxide resistance transcriptional regulator 0.40 0.56
    5 GFF3148 no description no 0.55
    6 GFF278 O-methyltransferase Rv0190 no 0.53
    7 GFF6977 Cytochrome b561 0.34 0.52
    8 GFF2761 Glutamine ABC transporter, permease protein GlnP no 0.52
    9 GFF108 General secretion pathway protein G no 0.52
    10 GFF5047 hypothetical protein no 0.51
    11 GFF1478 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) no 0.51
    12 GFF4537 Tetrapartite efflux system, inner membrane component FusBC-like no 0.51
    13 GFF4966 no description no 0.51
    14 GFF4023 no description no 0.50
    15 GFF2022 Acyl-CoA dehydrogenase no 0.50
    16 GFF3228 hypothetical protein no 0.49
    17 GFF5274 Various polyols ABC transporter, permease protein 2 no 0.49
    18 GFF5669 hypothetical protein no 0.49
    19 GFF4806 Arsenate reductase (EC 1.20.4.1) glutaredoxin-coupled, glutaredoxin-like family no 0.49
    20 GFF1303 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.48

    Or look for negative cofitness