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Cofit
Protein
Homologs
Top cofit genes for GFF6678 from
Variovorax sp. SCN45
Putative inner membrane protein
SEED: inner membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF394
Putative amidase R03093
no
0.54
2
GFF4895
FIG074102: hypothetical protein
0.27
0.54
3
GFF2171
MBL-fold metallohydrolase SPO0683
no
0.52
4
GFF564
hypothetical protein
no
0.52
5
GFF256
Twitching motility protein PilT
no
0.51
6
GFF3911
Putative phosphoesterase
no
0.51
7
GFF5382
BUG/TctC family periplasmic protein
no
0.49
8
GFF6397
LysR family transcriptional regulator PA2758
no
0.49
9
GFF6287
no description
no
0.49
10
GFF493
RND efflux system, inner membrane transporter
no
0.49
11
GFF5545
Pyrrolidone-carboxylate peptidase (EC 3.4.19.3)
no
0.49
12
GFF3937
Transcriptional regulator, AraC family
no
0.49
13
GFF6443
no description
no
0.48
14
GFF4277
Small subunit naph/bph dioxygenase
no
0.48
15
GFF2354
FIG00555615: hypothetical protein
no
0.48
16
GFF4272
BUG/TctC family periplasmic protein
no
0.48
17
GFF5284
RNA polymerase ECF-type sigma factor
no
0.48
18
GFF976
no description
no
0.48
19
GFF7289
5'-methylthioadenosine nucleosidase (EC 3.2.2.16) @ S-adenosylhomocysteine nucleosidase (EC 3.2.2.9)
no
0.47
20
GFF842
hypothetical protein
no
0.47
Or look for
negative cofitness