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  • Top cofit genes for GFF6676 from Variovorax sp. SCN45

    Ammonium transporter
    SEED: Ammonium transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1730 Dihydrofolate reductase homolog no 0.53
    2 GFF2124 Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, thiol-disulfide reductase involved in Cu(I) insertion into CoxII Cu(A) center 0.47 0.49
    3 GFF3027 T6SS component TssK (ImpJ/VasE) no 0.47
    4 GFF7017 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.47
    5 GFF3932 Acetyltransferase, GNAT family no 0.45
    6 GFF6014 Transcriptional regulator, LysR family no 0.45
    7 GFF6839 hypothetical protein no 0.44
    8 GFF7139 MATE efflux family protein no 0.43
    9 GFF5255 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) no 0.43
    10 GFF248 Cell division protein FtsH (EC 3.4.24.-) no 0.42
    11 GFF6403 Stresses-induced protein Ves (HutD) no 0.42
    12 GFF986 DinG family ATP-dependent helicase YoaA no 0.41
    13 GFF4422 Conjugative transfer protein TrbG no 0.41
    14 GFF3556 BUG/TctC family periplasmic protein no 0.41
    15 GFF6523 hypothetical protein no 0.40
    16 GFF6459 Two-component transcriptional regulatory protein BasR/PmrA (activated by BasS/PmrB) no 0.40
    17 GFF1008 Glyoxalase family protein no 0.39
    18 GFF4460 Phosphatidate cytidylyltransferase (EC 2.7.7.41) no 0.39
    19 GFF4272 BUG/TctC family periplasmic protein no 0.39
    20 GFF5510 protein of unknown function DUF306, Meta and HslJ no 0.39

    Or look for negative cofitness