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Cofit
Protein
Homologs
Top cofit genes for GFF6676 from
Variovorax sp. SCN45
Ammonium transporter
SEED: Ammonium transporter
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1730
Dihydrofolate reductase homolog
no
0.53
2
GFF2124
Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, thiol-disulfide reductase involved in Cu(I) insertion into CoxII Cu(A) center
0.47
0.49
3
GFF3027
T6SS component TssK (ImpJ/VasE)
no
0.47
4
GFF7017
ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines)
no
0.47
5
GFF3932
Acetyltransferase, GNAT family
no
0.45
6
GFF6014
Transcriptional regulator, LysR family
no
0.45
7
GFF6839
hypothetical protein
no
0.44
8
GFF7139
MATE efflux family protein
no
0.43
9
GFF5255
ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines)
no
0.43
10
GFF248
Cell division protein FtsH (EC 3.4.24.-)
no
0.42
11
GFF6403
Stresses-induced protein Ves (HutD)
no
0.42
12
GFF986
DinG family ATP-dependent helicase YoaA
no
0.41
13
GFF4422
Conjugative transfer protein TrbG
no
0.41
14
GFF3556
BUG/TctC family periplasmic protein
no
0.41
15
GFF6523
hypothetical protein
no
0.40
16
GFF6459
Two-component transcriptional regulatory protein BasR/PmrA (activated by BasS/PmrB)
no
0.40
17
GFF1008
Glyoxalase family protein
no
0.39
18
GFF4460
Phosphatidate cytidylyltransferase (EC 2.7.7.41)
no
0.39
19
GFF4272
BUG/TctC family periplasmic protein
no
0.39
20
GFF5510
protein of unknown function DUF306, Meta and HslJ
no
0.39
Or look for
negative cofitness