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  • Top cofit genes for GFF6672 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4043 Copper sensory histidine kinase CusS no 0.64
    2 GFF6080 Putative deoxyribonuclease YjjV no 0.53
    3 GFF159 Acyl-CoA dehydrogenase/oxidase domain protein no 0.52
    4 GFF3320 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) no 0.51
    5 GFF1487 Tetrapartite efflux system component, FusD-like no 0.50
    6 GFF5477 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.50
    7 GFF2917 Gluconolactonase (EC 3.1.1.17) no 0.49
    8 GFF2372 Similar to citrate lyase beta chain, 3 no 0.49
    9 GFF7060 BUG/TctC family periplasmic protein no 0.47
    10 GFF7263 Malate dehydrogenase (EC 1.1.1.37) no 0.47
    11 GFF2107 no description no 0.46
    12 GFF6752 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase (EC 1.2.1.91) / 2-oxepin-2(3H)-ylideneacetyl-CoA hydrolase (EC 3.3.2.12) no 0.46
    13 GFF2221 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.46
    14 GFF2264 Transcriptional regulator, LysR family no 0.45
    15 GFF2466 no description no 0.45
    16 GFF3444 BUG/TctC family periplasmic protein no 0.45
    17 GFF4 VapC toxin protein no 0.44
    18 GFF1812 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.44
    19 GFF3446 Quinone oxidoreductase (EC 1.6.5.5) no 0.44
    20 GFF7084 Mobile element protein no 0.44

    Or look for negative cofitness