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  • Top cofit genes for GFF6659 from Variovorax sp. SCN45

    Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtB (RND type)
    SEED: Acriflavin resistance protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5379 Putative hydrolase no 0.62
    2 GFF4237 no description no 0.58
    3 GFF971 NLP/P60 protein 0.43 0.57
    4 GFF5860 no description no 0.56
    5 GFF3917 Ferrous iron transporter FeoB no 0.56
    6 GFF6658 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) 0.96 0.55
    7 GFF534 Two-component system sensor histidine kinase no 0.53
    8 GFF5288 Uncharacterized protein PA4513 0.37 0.51
    9 GFF5442 Septum-associated rare lipoprotein A no 0.51
    10 GFF955 N-acetylmuramoyl-L-alanine amidase, family 2 no 0.51
    11 GFF5160 Outer membrane protein W precursor no 0.50
    12 GFF5295 Ferrichrome-iron receptor no 0.50
    13 GFF3910 MORN repeat family protein no 0.49
    14 GFF5286 Ferrichrome-iron receptor no 0.48
    15 GFF5947 Large extracellular alpha-helical protein no 0.48
    16 GFF6698 ClpXP protease specificity-enhancing factor SspB 0.62 0.48
    17 GFF6719 hypothetical protein no 0.48
    18 GFF6171 Na(+) H(+) antiporter subunit D no 0.47
    19 GFF5314 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ no 0.47
    20 GFF4426 Homolog of eukaryotic DNA ligase III no 0.47

    Or look for negative cofitness