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  • Top cofit genes for GFF6654 from Variovorax sp. SCN45

    Transcriptional regulator, RpiR family
    SEED: Transcriptional regulators

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4744 Permease of the drug/metabolite transporter (DMT) superfamily no 0.50
    2 GFF2492 BUG/TctC family periplasmic protein no 0.49
    3 GFF6849 MotA/TolQ/ExbB proton channel family protein no 0.48
    4 GFF3931 Protein sirB1 no 0.47
    5 GFF3577 Transcriptional regulator, LysR family no 0.45
    6 GFF2201 hypothetical protein no 0.45
    7 GFF119 FIG00348677: hypothetical protein no 0.45
    8 GFF3130 hypothetical protein no 0.45
    9 GFF5103 Class II aldolase/adducin, N-terminal no 0.44
    10 GFF3143 hypothetical protein no 0.44
    11 GFF1131 putative fatty acid desaturase no 0.43
    12 GFF5925 no description no 0.43
    13 GFF4604 TesB-like acyl-CoA thioesterase 2 no 0.43
    14 GFF6844 Putative PpiC-type peptidyl-prolyl cis-trans isomerase precursor associated with VreARI signaling system no 0.42
    15 GFF5844 Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) @ Outer membrane phospholipase A no 0.41
    16 GFF4144 Prolyl endopeptidase (EC 3.4.21.26) no 0.41
    17 GFF2309 DNA alkylation repair enzyme no 0.41
    18 GFF2674 FIG00653968: hypothetical protein no 0.41
    19 GFF4917 no description no 0.41
    20 GFF3012 T6SS component TssC (ImpC/VipB) no 0.41

    Or look for negative cofitness