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  • Top cofit genes for GFF6653 from Variovorax sp. SCN45

    Aminotransferase, class III
    SEED: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
    KEGG:

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF849 putative carboxylesterase no 0.68
    2 GFF3483 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.67
    3 GFF2844 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) no 0.65
    4 GFF627 Secretion protein HlyD no 0.63
    5 GFF2 Transcription accessory protein (S1 RNA-binding domain) no 0.61
    6 GFF1468 Transcriptional regulator, GntR family 0.23 0.60
    7 GFF6374 predicted 2-keto-3-deoxyxylonate dehydratase no 0.60
    8 GFF4634 Transketolase, C-terminal section (EC 2.2.1.1) no 0.59
    9 GFF4216 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.59
    10 GFF374 Transcription elongation factor GreA 0.61 0.59
    11 GFF6997 Flagellar basal-body rod protein FlgC no 0.59
    12 GFF6354 T6SS component TssK (ImpJ/VasE) no 0.58
    13 GFF2357 DNA repair protein RecN no 0.58
    14 GFF6242 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD 0.22 0.58
    15 GFF4581 hypothetical protein no 0.58
    16 GFF6782 TRAP transporter solute receptor, TAXI family precursor no 0.57
    17 GFF1346 hypothetical protein no 0.57
    18 GFF2173 no description no 0.57
    19 GFF2293 tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207) no 0.57
    20 GFF1775 no description no 0.56

    Or look for negative cofitness