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  • Top cofit genes for GFF6647 from Variovorax sp. SCN45

    Two-component transcriptional response regulator, LuxR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF920 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.57
    2 GFF3759 Uridine kinase family protein YggC homolog no 0.56
    3 GFF4487 putative secreted protein no 0.54
    4 GFF6636 Hydrolase, alpha/beta fold family no 0.53
    5 GFF1863 Uncharacterized MFS-type transporter no 0.52
    6 GFF6566 hypothetical protein no 0.52
    7 GFF4423 Conjugative transfer protein TrbI no 0.51
    8 GFF2105 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.50
    9 GFF4931 peptidase, family M14 no 0.49
    10 GFF5193 Galactofuranose ABC transporter, substrate-binding protein no 0.49
    11 GFF1499 BUG/TctC family periplasmic protein no 0.48
    12 GFF6810 no description no 0.48
    13 GFF2630 Ligand-binding SRPBCC domain protein family no 0.48
    14 GFF814 BUG/TctC family periplasmic protein no 0.47
    15 GFF1796 NADP-dependent malic enzyme (EC 1.1.1.40) no 0.47
    16 GFF7046 FIG00854755: hypothetical protein no 0.47
    17 GFF6082 MoxR-like ATPase in aerotolerance operon no 0.46
    18 GFF320 RNA polymerase ECF-type sigma factor no 0.46
    19 GFF4784 no description no 0.45
    20 GFF2639 Ferrichrome-iron receptor no 0.45

    Or look for negative cofitness