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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF6647 from
Variovorax sp. SCN45
Two-component transcriptional response regulator, LuxR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF920
Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily
no
0.57
2
GFF3759
Uridine kinase family protein YggC homolog
no
0.56
3
GFF4487
putative secreted protein
no
0.54
4
GFF6636
Hydrolase, alpha/beta fold family
no
0.53
5
GFF1863
Uncharacterized MFS-type transporter
no
0.52
6
GFF6566
hypothetical protein
no
0.52
7
GFF4423
Conjugative transfer protein TrbI
no
0.51
8
GFF2105
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
no
0.50
9
GFF4931
peptidase, family M14
no
0.49
10
GFF5193
Galactofuranose ABC transporter, substrate-binding protein
no
0.49
11
GFF1499
BUG/TctC family periplasmic protein
no
0.48
12
GFF6810
no description
no
0.48
13
GFF2630
Ligand-binding SRPBCC domain protein family
no
0.48
14
GFF814
BUG/TctC family periplasmic protein
no
0.47
15
GFF1796
NADP-dependent malic enzyme (EC 1.1.1.40)
no
0.47
16
GFF7046
FIG00854755: hypothetical protein
no
0.47
17
GFF6082
MoxR-like ATPase in aerotolerance operon
no
0.46
18
GFF320
RNA polymerase ECF-type sigma factor
no
0.46
19
GFF4784
no description
no
0.45
20
GFF2639
Ferrichrome-iron receptor
no
0.45
Or look for
negative cofitness