Top cofit genes for GFF6642 from Variovorax sp. SCN45

ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines)
SEED: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
KEGG: peptide/nickel transport system permease protein

Rank Hit Name Description Conserved? Cofitness  
1 GFF7295 HPr kinase/phosphorylase no 0.69
2 GFF6200 integral membrane sensor signal transduction histidine kinase no 0.67
3 GFF6638 no description no 0.65
4 GFF72 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) 0.26 0.63
5 GFF967 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) no 0.62
6 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.61
7 GFF1395 Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase II no 0.60
8 GFF183 Virulence protein no 0.59
9 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) 0.42 0.58
10 GFF5040 3-hydroxypropionate dehydrogenase DddA, flavin-containing (EC 1.1.1.59) 0.40 0.58
11 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) no 0.58
12 GFF4397 hypothetical protein no 0.57
13 GFF1493 BUG/TctC family periplasmic protein no 0.57
14 GFF239 DNA polymerase III chi subunit (EC 2.7.7.7) no 0.57
15 GFF3945 Phosphate transport regulator (distant homolog of PhoU) no 0.57
16 GFF322 GTP cyclohydrolase II homolog no 0.57
17 GFF1384 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) no 0.56
18 GFF5799 Urea ABC transporter, substrate-binding protein UrtA no 0.56
19 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.56
20 GFF3923 Kynurenine formamidase, bacterial (EC 3.5.1.9) no 0.56

Or look for negative cofitness