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Cofit
Protein
Homologs
Top cofit genes for GFF6627 from
Variovorax sp. SCN45
Mobile element protein
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2937
Transcriptional regulator, LysR family
no
0.58
2
GFF4409
Aldehyde dehydrogenase (EC 1.2.1.3)
no
0.56
3
GFF4408
3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type
no
0.55
4
GFF5161
Glutathione S-transferase (EC 2.5.1.18)
no
0.55
5
GFF4240
Integral membrane protein
no
0.53
6
GFF7292
ATP-dependent DNA helicase UvrD/PcrA, proteobacterial paralog
no
0.52
7
GFF6153
Transcriptional activator of acetoin/glycerol metabolism
no
0.51
8
GFF5550
DNA protection during starvation protein
no
0.50
9
GFF7322
hypothetical protein
no
0.50
10
GFF5488
Protein of unknown function Smg
no
0.50
11
GFF259
Bis-ABC ATPase YheS
no
0.50
12
GFF3807
FIG00538552: hypothetical protein
no
0.49
13
GFF4406
Alkane-1 monooxygenase (EC 1.14.15.3)
no
0.48
14
GFF1507
ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines)
no
0.48
15
GFF6115
ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines)
no
0.48
16
GFF4022
UPF0060 membrane protein YnfA
no
0.47
17
GFF7097
Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16)
no
0.47
18
GFF1866
Dihydropyrimidinase (EC 3.5.2.2) @ D-hydantoinase (EC 3.5.2.2)
no
0.47
19
GFF3955
Histidinol-phosphate aminotransferase (EC 2.6.1.9)
no
0.46
20
GFF2729
hypothetical protein
no
0.46
Or look for
negative cofitness