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  • Top cofit genes for GFF6627 from Variovorax sp. SCN45

    Mobile element protein
    SEED: Mobile element protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2937 Transcriptional regulator, LysR family no 0.58
    2 GFF4409 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.56
    3 GFF4408 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type no 0.55
    4 GFF5161 Glutathione S-transferase (EC 2.5.1.18) no 0.55
    5 GFF4240 Integral membrane protein no 0.53
    6 GFF7292 ATP-dependent DNA helicase UvrD/PcrA, proteobacterial paralog no 0.52
    7 GFF6153 Transcriptional activator of acetoin/glycerol metabolism no 0.51
    8 GFF5550 DNA protection during starvation protein no 0.50
    9 GFF7322 hypothetical protein no 0.50
    10 GFF5488 Protein of unknown function Smg no 0.50
    11 GFF259 Bis-ABC ATPase YheS no 0.50
    12 GFF3807 FIG00538552: hypothetical protein no 0.49
    13 GFF4406 Alkane-1 monooxygenase (EC 1.14.15.3) no 0.48
    14 GFF1507 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.48
    15 GFF6115 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.48
    16 GFF4022 UPF0060 membrane protein YnfA no 0.47
    17 GFF7097 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) no 0.47
    18 GFF1866 Dihydropyrimidinase (EC 3.5.2.2) @ D-hydantoinase (EC 3.5.2.2) no 0.47
    19 GFF3955 Histidinol-phosphate aminotransferase (EC 2.6.1.9) no 0.46
    20 GFF2729 hypothetical protein no 0.46

    Or look for negative cofitness