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  • Top cofit genes for GFF6613 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1920 Cysteine dioxygenase (EC 1.13.11.20) no 0.69
    2 GFF4822 Thiamine pyrophosphate-requiring enzymes no 0.63
    3 GFF4868 Type IV secretory pathway, VirD2 components (relaxase) no 0.60
    4 GFF1769 Urease accessory protein UreD no 0.60
    5 GFF757 hypothetical protein no 0.58
    6 GFF5645 ABC transporter, permease protein (cluster 12, methionine/phosphonates) / ABC transporter, permease protein (cluster 12, methionine/phosphonates) no 0.58
    7 GFF4926 Probable carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) no 0.57
    8 GFF6347 AAA+ ATPase superfamily protein YifB/ComM, associated with DNA recombination no 0.56
    9 GFF2083 putative periplasmic membrane protein no 0.55
    10 GFF1266 Cysteine desulfurase (EC 2.8.1.7) no 0.55
    11 GFF5239 hypothetical protein no 0.55
    12 GFF592 Glutamyl-Q tRNA(Asp) synthetase no 0.54
    13 GFF3074 Putative polysaccharide deacetylase no 0.53
    14 GFF854 hypothetical protein no 0.52
    15 GFF1481 L-carnitine dehydratase/bile acid-inducible protein F no 0.52
    16 GFF5647 ABC transporter, ATP-binding protein (cluster 12, methionine/phosphonates) no 0.52
    17 GFF5018 Uncharacterized protein YpeB no 0.51
    18 GFF6819 hypothetical protein no 0.51
    19 GFF379 Ribonuclease HII (EC 3.1.26.4) no 0.51
    20 GFF3574 hypothetical protein no 0.50

    Or look for negative cofitness