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Cofit
Protein
Homologs
Top cofit genes for GFF6610 from
Variovorax sp. SCN45
putative lipoprotein
SEED: Probable lipoprotein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6045
FIG00932121: hypothetical protein
no
0.52
2
GFF1016
no description
no
0.51
3
GFF3440
FIG00460300: hypothetical protein
no
0.50
4
GFF3981
ABC-type branched-chain amino acid transport systems, periplasmic component
no
0.50
5
GFF41
no description
no
0.50
6
GFF1023
UPF0311 protein RPA1785
no
0.50
7
GFF2582
Uncharacterized DUF3460-containg protein Bmul_0854
no
0.49
8
GFF2444
Integral membrane protein, interacts with FtsH
no
0.49
9
GFF1555
Transcriptional regulator, LysR family
no
0.48
10
GFF5935
VgrG protein
no
0.48
11
GFF1711
DUF3701 domain / Site-specific tyrosine recombinase
no
0.48
12
GFF3397
Benzoate ABC transporter, substrate-binding protein
no
0.47
13
GFF7043
Putative transmembrane protein
no
0.45
14
GFF1134
FIG00931167: hypothetical protein
no
0.45
15
GFF5289
hypothetical protein
no
0.45
16
GFF2432
Fe2+-dicitrate sensor, membrane component
no
0.45
17
GFF3611
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
no
0.44
18
GFF3963
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35)
no
0.44
19
GFF877
putative membrane protein
no
0.44
20
GFF5946
T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA
no
0.44
Or look for
negative cofitness