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  • Top cofit genes for GFF6610 from Variovorax sp. SCN45

    putative lipoprotein
    SEED: Probable lipoprotein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6045 FIG00932121: hypothetical protein no 0.52
    2 GFF1016 no description no 0.51
    3 GFF3440 FIG00460300: hypothetical protein no 0.50
    4 GFF3981 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.50
    5 GFF41 no description no 0.50
    6 GFF1023 UPF0311 protein RPA1785 no 0.50
    7 GFF2582 Uncharacterized DUF3460-containg protein Bmul_0854 no 0.49
    8 GFF2444 Integral membrane protein, interacts with FtsH no 0.49
    9 GFF1555 Transcriptional regulator, LysR family no 0.48
    10 GFF5935 VgrG protein no 0.48
    11 GFF1711 DUF3701 domain / Site-specific tyrosine recombinase no 0.48
    12 GFF3397 Benzoate ABC transporter, substrate-binding protein no 0.47
    13 GFF7043 Putative transmembrane protein no 0.45
    14 GFF1134 FIG00931167: hypothetical protein no 0.45
    15 GFF5289 hypothetical protein no 0.45
    16 GFF2432 Fe2+-dicitrate sensor, membrane component no 0.45
    17 GFF3611 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.44
    18 GFF3963 3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) no 0.44
    19 GFF877 putative membrane protein no 0.44
    20 GFF5946 T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA no 0.44

    Or look for negative cofitness