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  • Top cofit genes for GFF6600 from Variovorax sp. SCN45

    Sulfur carrier protein FdhD
    SEED: Formate dehydrogenase chain D (EC 1.2.1.2)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3698 ATP-dependent, 3'-5' DNA helicase with strand annealing activity no 0.59
    2 GFF4196 no description no 0.55
    3 GFF4457 Monofunctional biosynthetic peptidoglycan transglycosylase no 0.52
    4 GFF5941 hypothetical protein no 0.50
    5 GFF1777 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.49
    6 GFF3509 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) => MexI of MexHI-OpmD system no 0.48
    7 GFF6312 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) no 0.48
    8 GFF2361 hypothetical protein no 0.48
    9 GFF3610 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.47
    10 GFF7171 Transcriptional regulator DmlR, LysR family no 0.47
    11 GFF326 Polysaccharide deacetylase, caspase activity no 0.47
    12 GFF2738 hypothetical protein no 0.46
    13 GFF1375 Transcriptional regulator, LysR family no 0.46
    14 GFF1359 FMN-dependent NADH-azoreductase (EC 1.7.1.6) no 0.45
    15 GFF2947 3'-5' exonuclease no 0.45
    16 GFF80 no description no 0.44
    17 GFF6812 no description no 0.44
    18 GFF4567 Transcriptional regulator, LysR family no 0.44
    19 GFF6622 Mobile element protein no 0.44
    20 GFF7254 Mannonate dehydratase (EC 4.2.1.8) no 0.44

    Or look for negative cofitness