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  • Top cofit genes for GFF66 from Variovorax sp. SCN45

    hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF182 FIG00347566: hypothetical protein no 0.61
    2 GFF37 Similar to Agmatine deiminase no 0.59
    3 GFF6916 Methyltransferase type 11 no 0.57
    4 GFF4453 Esterase YqiA no 0.57
    5 GFF3458 Rubisco activation protein CbbQ no 0.56
    6 GFF39 Transcriptional regulator, LysR family no 0.55
    7 GFF5192 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) no 0.55
    8 GFF1623 Glycerol-3-phosphate transporter no 0.54
    9 GFF5870 hypothetical protein no 0.54
    10 GFF1543 Putative SigmaB asociated two-component system sensor protein no 0.54
    11 GFF327 5'-methylthioadenosine nucleosidase (EC 3.2.2.16) @ S-adenosylhomocysteine nucleosidase (EC 3.2.2.9) no 0.53
    12 GFF7067 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.52
    13 GFF2912 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.52
    14 GFF5582 BUG/TctC family periplasmic protein no 0.52
    15 GFF3343 D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4) no 0.51
    16 GFF3006 hypothetical protein no 0.51
    17 GFF4104 Cystathionine beta-lyase (EC 4.4.1.8) no 0.51
    18 GFF1811 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.51
    19 GFF6262 Transcriptional regulator PhnF no 0.51
    20 GFF504 SAM-dependent methyltransferases no 0.51

    Or look for negative cofitness