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  • Top cofit genes for GFF6594 from Variovorax sp. SCN45

    Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase)
    SEED: Sterol desaturase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1526 putative transmembrane sensor no 0.61
    2 GFF2267 Integral membrane protein no 0.55
    3 GFF4392 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.53
    4 GFF5262 Ferric iron ABC transporter, iron-binding protein no 0.53
    5 GFF1592 Response regulator/GGDEF/EAL domain protein no 0.52
    6 GFF5069 BUG/TctC family periplasmic protein no 0.52
    7 GFF3166 Transcriptional regulator, IclR family no 0.50
    8 GFF7086 Transcriptional regulator, IclR family no 0.50
    9 GFF684 FIG00553873: hypothetical protein no 0.49
    10 GFF2796 Dihydrodipicolinate synthase family protein PP2639 no 0.49
    11 GFF1393 hypothetical protein no 0.49
    12 GFF6243 Ku domain protein no 0.49
    13 GFF3508 Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system no 0.48
    14 GFF4203 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative no 0.48
    15 GFF1691 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake no 0.47
    16 GFF5847 putative membrane protein no 0.47
    17 GFF3000 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) no 0.47
    18 GFF3228 hypothetical protein no 0.47
    19 GFF1451 FIG00456379: hypothetical protein no 0.47
    20 GFF4804 tRNA threonylcarbamoyladenosine biosynthesis protein TsaE no 0.47

    Or look for negative cofitness