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  • Top cofit genes for GFF6589 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5184 no description no 0.50
    2 GFF2866 Uncharacterized MFS-type transporter no 0.48
    3 GFF3136 no description no 0.47
    4 GFF1850 Tetracenomycin polyketide synthesis O-methyltransferase TcmP no 0.43
    5 GFF5944 Adenylosuccinate lyase (EC 4.3.2.2) no 0.43
    6 GFF1918 hypothetical protein no 0.42
    7 GFF2259 Alcohol dehydrogenase (EC 1.1.1.1) no 0.41
    8 GFF5967 Beta-propeller domains of methanol dehydrogenase type no 0.39
    9 GFF6212 Transcriptional regulator, AsnC family no 0.39
    10 GFF4701 Various polyols ABC transporter, permease protein 2 no 0.39
    11 GFF2607 hypothetical protein no 0.39
    12 GFF4046 Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA no 0.39
    13 GFF5616 hypothetical protein no 0.39
    14 GFF1983 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase (EC 3.1.3.82); Histidinol-phosphatase (EC 3.1.3.15) no 0.38
    15 GFF6535 Permease of the drug/metabolite transporter (DMT) superfamily no 0.38
    16 GFF2698 Transcriptional regulator, LysR family no 0.38
    17 GFF5938 T6SS component TssF (ImpG/VasA) no 0.38
    18 GFF4534 Tetrapartite efflux system, outer membrane factor lipoprotein FusA-like no 0.38
    19 GFF629 hypothetical protein no 0.38
    20 GFF1066 Aspartate aminotransferase (EC 2.6.1.1) no 0.38

    Or look for negative cofitness