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  • Top cofit genes for GFF6587 from Variovorax sp. SCN45

    Hydroxypyruvate isomerase (EC 5.3.1.22)
    SEED: Hydroxypyruvate isomerase (EC 5.3.1.22)
    KEGG: hydroxypyruvate isomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7043 Putative transmembrane protein no 0.62
    2 GFF1758 KEGG: carboxymethylenebutenolidase no 0.56
    3 GFF3547 no description no 0.55
    4 GFF2367 Transcriptional regulator, LysR family no 0.54
    5 GFF2205 hypothetical protein no 0.54
    6 GFF929 Transcriptional regulator, IclR family 0.33 0.52
    7 GFF7059 Zinc uptake regulation protein Zur no 0.51
    8 GFF1096 Phosphate transport system regulatory protein PhoU no 0.51
    9 GFF5985 dicarboxylic acid transporter PcaT no 0.51
    10 GFF2400 no description 0.88 0.50
    11 GFF177 Glutamine ABC transporter, ATP-binding protein GlnQ no 0.50
    12 GFF1451 FIG00456379: hypothetical protein no 0.50
    13 GFF5396 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.49
    14 GFF1393 hypothetical protein no 0.48
    15 GFF2969 acyl-CoA synthetase (NDP forming type) no 0.47
    16 GFF4775 Broad-specificity amino acid ABC transporter, substrate-binding protein 0.21 0.47
    17 GFF6480 hypothetical protein no 0.47
    18 GFF5390 RecA protein no 0.47
    19 GFF4774 Broad-specificity amino acid ABC transporter, ATP-binding protein 2 no 0.47
    20 GFF1383 Hypothetical protein in cluster with At3g50560-like gene family no 0.47

    Or look for negative cofitness