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  • Top cofit genes for GFF6579 from Variovorax sp. SCN45

    Conjugative transfer protein TrbB
    SEED: Conjugative transfer protein TrbB
    KEGG: type IV secretion system protein VirB11

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5272 Various polyols ABC transporter, substrate-binding protein no 0.68
    2 GFF110 pyridoxal-phosphate dependent enzyme family protein no 0.67
    3 GFF3081 no description no 0.64
    4 GFF7174 no description no 0.63
    5 GFF2646 Acetyl-CoA acetyltransferase no 0.63
    6 GFF5849 FIG01210206: hypothetical protein no 0.62
    7 GFF5825 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.62
    8 GFF5552 MaoC domain protein dehydratase no 0.60
    9 GFF107 General secretion pathway protein K no 0.60
    10 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) no 0.60
    11 GFF5053 Uncharacterized protein SPO0681 no 0.60
    12 GFF862 hypothetical protein no 0.59
    13 GFF1837 Transcriptional regulator, LysR family no 0.58
    14 GFF1188 Thiazole synthase (EC 2.8.1.10) no 0.57
    15 GFF2643 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.57
    16 GFF7046 FIG00854755: hypothetical protein no 0.57
    17 GFF2602 no description no 0.57
    18 GFF4345 hypothetical protein no 0.56
    19 GFF5116 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD no 0.56
    20 GFF129 Ankyrin no 0.56

    Or look for negative cofitness