Top cofit genes for GFF6576 from Variovorax sp. SCN45

Conjugative transfer protein TrbE
SEED: Conjugative transfer protein TrbE
KEGG: type IV secretion system protein VirB4

Rank Hit Name Description Conserved? Cofitness  
1 GFF1435 BUG/TctC family periplasmic protein no 0.57
2 GFF1602 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) no 0.56
3 GFF2868 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) no 0.56
4 GFF6606 no description no 0.54
5 GFF7352 1,2-phenylacetyl-CoA epoxidase, subunit D (EC 1.14.13.149) no 0.53
6 GFF4925 ATPase component BioM of energizing module of biotin ECF transporter no 0.52
7 GFF1305 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.52
8 GFF5664 hypothetical protein no 0.51
9 GFF1485 Transcriptional regulator, AraC family no 0.51
10 GFF6221 T6SS associated component TagF (ImpM) no 0.51
11 GFF202 Transcriptional regulator, LysR family no 0.50
12 GFF4321 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.50
13 GFF1111 probable membrane protein NMA1176 no 0.50
14 GFF573 Valine--pyruvate aminotransferase (EC 2.6.1.66) no 0.49
15 GFF1379 Uncharacterized MFS-type transporter no 0.49
16 GFF5142 no description no 0.49
17 GFF483 Fumarate hydratase class I, aerobic (EC 4.2.1.2) no 0.49
18 GFF4254 hypothetical protein no 0.48
19 GFF5440 RNA polymerase ECF-type sigma factor no 0.48
20 GFF149 Acyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase 40 kDa form (EC 2.3.1.164) no 0.48

Or look for negative cofitness