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  • Top cofit genes for GFF6575 from Variovorax sp. SCN45

    Conjugative transfer protein TrbJ
    SEED: Conjugative transfer protein TrbJ

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5053 Uncharacterized protein SPO0681 no 0.75
    2 GFF3309 Beta-hexosaminidase (EC 3.2.1.52) no 0.73
    3 GFF3416 Alkanesulfonates transport system permease protein no 0.69
    4 GFF5272 Various polyols ABC transporter, substrate-binding protein no 0.64
    5 GFF2646 Acetyl-CoA acetyltransferase no 0.63
    6 GFF3273 Translation initiation factor 2 no 0.62
    7 GFF110 pyridoxal-phosphate dependent enzyme family protein no 0.62
    8 GFF6998 Flagellar basal-body rod protein FlgB no 0.60
    9 GFF2711 hypothetical protein no 0.59
    10 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) no 0.59
    11 GFF1012 Cystathionine beta-lyase (EC 4.4.1.8) no 0.59
    12 GFF5984 L-lactate dehydrogenase no 0.59
    13 GFF1737 Carbon starvation protein A no 0.57
    14 GFF627 Secretion protein HlyD no 0.57
    15 GFF3496 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.56
    16 GFF1636 Non-ribosomal peptide synthetase modules, pyoverdine @ Siderophore biosynthesis non-ribosomal peptide synthetase modules no 0.56
    17 GFF1652 Uncharacterized MFS-type transporter no 0.56
    18 GFF539 no description no 0.56
    19 GFF4736 Nitrate ABC transporter, permease protein no 0.56
    20 GFF3367 Septum site-determining protein MinC no 0.55

    Or look for negative cofitness