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  • Top cofit genes for GFF6571 from Variovorax sp. SCN45

    Conjugative transfer protein TrbI
    SEED: Conjugative transfer protein TrbI
    KEGG: type IV secretion system protein VirB10

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2049 Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24) no 0.66
    2 GFF348 Superoxide dismutase [Fe] (EC 1.15.1.1) no 0.62
    3 GFF1598 no description no 0.61
    4 GFF5422 putative membrane protein no 0.59
    5 GFF2371 BUG/TctC family periplasmic protein no 0.58
    6 GFF3349 Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1) no 0.58
    7 GFF2737 Uncharacterized MFS-type transporter no 0.58
    8 GFF1172 hypothetical protein no 0.58
    9 GFF6549 no description no 0.57
    10 GFF4129 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.57
    11 GFF5909 Selenophosphate synthetase-related protein MJ0640 no 0.56
    12 GFF2184 VWA containing CoxE family protein no 0.55
    13 GFF5813 Heavy metal sensor histidine kinase no 0.55
    14 GFF3495 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.55
    15 GFF2196 no description no 0.55
    16 GFF3018 VgrG protein no 0.55
    17 GFF1515 Flagellar hook-length control protein FliK no 0.54
    18 GFF116 RidA/YER057c/UK114 superfamily, group 1 no 0.54
    19 GFF6891 Phenazine biosynthesis protein PhzF like no 0.54
    20 GFF1985 Zinc metalloprotease no 0.54

    Or look for negative cofitness